Releases

• Clean citation style with Author-Year format PR #139.

• Functionality to switch to keops backend if it is installed and an out-of-memory error is raised PR #130.

• Code of conduct PR #127.

• Pull request template PR #125.

Version 0.1 (2024-09-17)

• Multiple basic affinities, including scalar product, Gaussian, and Student kernels.

• Affinities based on k-NN normalizations such as Self-tuning affinities and MAGIC.

• Doubly stochastic affinities with entropic and quadratic projections.

• Adaptive affinities with entropy control (entropic affinity) and its symmetric version.

• Input and output affinities of UMAP.

• A template object AffinityMatcher to solve DR with gradient descent and any input and output affinities.

• Neighbor embedding methods like SNE, t-SNE, t-SNEkhorn, UMAP, LargeVis, and InfoTSNE.

• Template objects for neighbor embedding methods.

• Spectral embeddings via eigendecomposition of the input affinity matrix (when applicable).

• KeOps compatibility for all components, except spectral embeddings.

• Silhouette score.